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better ways to detect outlier samples

Status: Open.

#32 In MoseleyBioinformaticsLab/visualizationQualityControl;

· rmflight opened on Mar 11, 2026

keep_non_zero_percentage should work with either 0 or NA

Status: Open.

#29 In MoseleyBioinformaticsLab/visualizationQualityControl;

· rmflight opened on Dec 4, 2023

Generate distribution of feature prevalence within and across sample classes

Status: Open.

#15 In MoseleyBioinformaticsLab/visualizationQualityControl;

· rmflight opened on Feb 1, 2017

weight correspondence by feature prevalence

Status: Open.

#14 In MoseleyBioinformaticsLab/visualizationQualityControl;

· rmflight opened on Feb 1, 2017

PCA using the augmented correlation matrix

Status: Open.

#13 In MoseleyBioinformaticsLab/visualizationQualityControl;

· rmflight opened on Jan 27, 2017

add option to set NA's to zero automatically

Status: Open.

#11 In MoseleyBioinformaticsLab/visualizationQualityControl;

· rmflight opened on Apr 15, 2016

generate a warning if there are NA's from pairwise_correlation

Status: Open.

#10 In MoseleyBioinformaticsLab/visualizationQualityControl;

· rmflight opened on Apr 15, 2016

calculate % of features unique to a sample

Status: Open.

#9 In MoseleyBioinformaticsLab/visualizationQualityControl;

· rmflight opened on Apr 13, 2016

Median Correlation Vignette

Status: Open.

#3 In MoseleyBioinformaticsLab/visualizationQualityControl;

· jesudk2 opened on Mar 11, 2016